Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs80151891 chr2:238398826 G/T 0.000103 111 12.65 18.25 0 KM Plot
LAML rs80190845 chr7:135597627 G/A 0.000135 105 13.1 29.4 0 KM Plot
LAML rs80254589 chr6:34478514 C/T 0.000175 106 16.27 8.1 0 KM Plot
LAML rs807054 chr1:26237335 A/G 0.00015 107 0 19.33 12.2 KM Plot
LAML rs807250 chr1:26118149 A/G 0.000116 111 0 22.37 12.2 KM Plot
LAML rs8078770 chr17:39453122 A/C 0.000111 111 0 19.23 13.2 KM Plot
LAML rs8078900 chr17:28591709 C/A 0.000116 111 19.82 15.7 6.1 KM Plot
LAML rs8080149 chr17:28623905 C/T 0.000116 111 19.82 15.7 6.1 KM Plot
LAML rs8100341 chr19:12578004 C/G 1.87E-5 111 6.13 22.37 13.1 KM Plot
LAML rs8103307 chr19:12554885 T/C 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs8111862 chr19:12559713 C/T 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs8116164 chr20:61612628 A/G 0.000165 109 0 20.27 12.17 KM Plot
LAML rs8122874 chr20:4771336 G/T 7.85E-5 106 13.1 26.4 1.5 KM Plot
LAML rs824398 chr16:83990055 T/C 7.79E-5 107 1.02 20.82 13.1 KM Plot
LAML rs826539 chr2:109337462 G/A 0.000152 110 13.1 20.3 0 KM Plot